Publications

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2012
Hsing, CR, Wei CM, Chou MY.  2012.  Quantum Monte Carlo investigations of adsorption energetics on graphene, Oct. Journal of Physics-Condensed Matter. 24:7., Number 39 AbstractWebsite

We have performed calculations of adsorption energetics on the graphene surface using the state-of-the-art diffusion quantum Monte Carlo method. Two types of configurations are considered in this work: the adsorption of a single O, F, or H atom on the graphene surface and the H-saturated graphene system (graphane). The adsorption energies are compared with those obtained from density functional theory with various exchange-correlation functionals. The results indicate that the approximate exchange-correlation functionals significantly overestimate the binding of O and F atoms on graphene, although the preferred adsorption sites are consistent. The energy errors are much less for atomic hydrogen adsorbed on the surface. We also find that a single O or H atom on graphene has a higher energy than in the molecular state, while the adsorption of a single F atom is preferred over the gas phase. In addition, the energetics of graphane is reported. The calculated equilibrium lattice constant turns out to be larger than that of graphene, at variance with a recent experimental suggestion.

Xian, LD, Chou MY.  2012.  Diffusion of Si and C atoms on and between graphene layers, Nov. Journal of Physics D-Applied Physics. 45:6., Number 45 AbstractWebsite

The growth of epitaxial graphene on SiC surfaces is accompanied by the evaporation of Si atoms during the growth process. The continuous loss of Si atoms takes place even after the surface graphene layers are formed. Understanding the atomic transport process involved is critical in establishing a growth mechanism to model and control the process. Using density functional theory, we have calculated the potential energy variation and studied the diffusion of Si and C atoms on a single layer of graphene and between graphene sheets. Our results show that Si atoms can move almost freely on graphene and between graphene layers, while C atoms have much larger diffusion barriers. This work provides a detailed description of the energetics of relevant processes in the growth of epitaxial graphene on SiC surfaces.

Huang, SJ, Hsu YT, Lee H, Chen YC, Volosniev AG, Zinner NT, Wang DW.  2012.  Field-induced long-lived supermolecules, May 7. Physical Review A. 85 AbstractWebsite

We demonstrate that the long-lived bound states (supermolecules) can exist in the dilute limit when we tune the shape of the effective potential between polar molecules by an external microwave field. Binding energies, average sizes, and phase diagrams for both s-orbital (bosons) and p-orbital (fermions) dimers are studied, together with bosonic trimer states. We explicitly show that the nonadiabatic transition rate can be easily tuned small for such ground-state supermolecules, so that the system can be stable from collapse even near the associated potential resonance. Our results, therefore, suggest a feasible cold molecule system to investigate novel few-body and many-body physics (for example, the p-wave BCS-Bose-Einstein-condensate crossover for fermions and the paired condensate for bosons) that cannot be easily accessed in single species atomic gases.

Sun, YY, Ruan WY, Gao XF, Bang J, Kim YH, Lee K, West D, Liu X, Chan TL, Chou MY, Zhang SB.  2012.  Phase diagram of graphene nanoribbons and band-gap bifurcation of Dirac fermions under quantum confinement, May. Physical Review B. 85:5., Number 19 AbstractWebsite

A p-T phase diagram of graphene nanoribbons (GNRs) terminated by hydrogen atoms is established based on first-principles calculations, where the stable phase at standard conditions (25 degrees C and 1 bar) is found to be a zigzag GNR (zzGNR). The stability of this new GNR is understood based on an electron-counting model, which predicts semiconducting nonmagnetic zzGNRs. Quantum confinement of Dirac fermions in the stable zzGNRs is found to be qualitatively different from that in ordinary semiconductors. Bifurcation of the band gap is predicted to take place, leading to the formation of polymorphs with distinct band gaps but equal thermodynamic stability. A tight-binding model analysis reveals the role of edge symmetry on the band-gap bifurcation.

Barraza-Lopez, S, Kindermann M, Chou MY.  2012.  Charge Transport through Graphene Junctions with Wetting Metal Leads, Jul. Nano Letters. 12:3424-3430., Number 7 AbstractWebsite

Graphene is believed to be an excellent candidate material for next-generation electronic devices. However, one needs to take into account the nontrivial effect of metal contacts in order to precisely control the charge injection and extraction processes. We have performed transport calculations for graphene junctions with wetting metal leads (metal leads that bind covalently to graphene) using nonequilibrium Green's functions and density functional theory. Quantitative information is provided on the increased resistance with respect to ideal contacts and on the statistics of current fluctuations. We find that charge transport through the studied two-terminal graphene junction with Ti contacts is pseudo-diffusive up to surprisingly high energies.

Wang, ZF, Liu F, Chou MY.  2012.  Fractal Landau-Level Spectra in Twisted Bilayer Graphene, Jul. Nano Letters. 12:3833-3838., Number 7 AbstractWebsite

The Hofstadter butterfly spectrum for Landau levels in a two-dimensional periodic lattice is a rare example exhibiting fractal properties in a truly quantum system. However, the observation of this physical phenomenon in a conventional material will require a magnetic field strength several orders of magnitude larger than what can be produced in a modern laboratory. It turns out that for a specific range of rotational angles twisted bilayer graphene serves as a special system with a fractal energy spectrum under laboratory accessible magnetic field strengths. This unique feature arises from an intriguing electronic structure induced by the interlayer coupling. Using a recursive tight-binding method, we systematically map out the spectra of these Landau levels as a function of the rotational angle. Our results give a complete description of LLs in twisted bilayer graphene for both commensurate and incommensurate rotational angles and provide quantitative predictions of magnetic field strengths for observing the fractal spectra in these graphene systems.

Yan, JA, Varga K, Chou MY.  2012.  Optical phonon anomaly in Bernal stacked bilayer graphene with ultrahigh carrier densities, Jul. Physical Review B. 86:5., Number 3 AbstractWebsite

Electron-phonon coupling (EPC) in Bernal stacked bilayer graphene (BLG) at different doping levels is studied by first-principles calculations. The phonons considered are long-wavelength high-energy symmetric and antisymmetric optical modes. Both are shown to have distinct EPC-induced phonon linewidths and frequency shifts as a function of the Fermi level E-F. We find that the antisymmetric mode has a strong coupling with the lowest two conduction bands when the Fermi level E-F is nearly 0.5 eV above the neutrality point, giving rise to a giant linewidth (more than 100 cm(-1)) and a significant frequency softening (similar to 60 cm(-1)). Our ab initio calculations show that the origin of the dramatic change arises from the unusual band structure in BLG. The results highlight the band structure effects on the EPC in BLG in the high-carrier-density regime.

Chang, CC, Hsieh MC, Lin JC, Chang TC.  2012.  Selective photodynamic therapy based on aggregation-induced emission enhancement of fluorescent organic nanoparticles, Jan. Biomaterials. 33:897-906., Number 3 AbstractWebsite

Three binary molecule conjugates were designed and synthesized by conjugating a chromophore (3, 6-bis-(1-methyl-4-vinylpyridinium)-carbazole diiodide, BMVC) to mono-, bis- and trishydroxyl photosensitizers, respectively. BMVC plays the role of cancer cells recognizer; AIEE (aggregation-induced emission enhancement) generator and FRET (Fluorescence Resonance Energy Transfer) donor. The self assembling properties of these binary conjugates result in different degrees of AIEE and then achieve the formations of FONs (fluorescent organic nanoparticles), which present efficient FRET and singlet oxygen generations. Biologically, FONs-photosensitizers from these compounds were much more phototoxicities to cancer cell than to normal cell without significant dark toxicity. In addition, their intracellular fluorescent colors switching upon photo-excitation are expected to be used for further cell death biomarker applications. This improved photodynamic activity might be due to the aggregation of compounds in the cell that form FONs which can promote PDT (photodynamic therapy) and are observed in cancer cell but not normal cell.

Lin, C-C, Wu M-C, Shiau B-W, Chen Y-H, Yu IA, Chen Y-F, Chen Y-C.  2012.  Enhanced all-optical switching with double slow light pulses, Dec 28. Physical Review A. 86 AbstractWebsite
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Chien, CH, Chen WW, Wu JT, Chang TC.  2012.  Investigation of lipid homeostasis in living Drosophila by coherent anti-Stokes Raman scattering microscopy, Dec. J Biomed Opt. 17:126001., Number 12 AbstractWebsite

To improve our understanding of lipid metabolism, Drosophila is used as a model animal, and its lipid homeostasis is monitored by coherent anti-Stokes Raman scattering microscopy. We are able to achieve in vivo imaging of larval fat body (analogous to adipose tissue in mammals) and oenocytes (analogous to hepatocytes) in Drosophila larvae at subcellular level without any labeling. By overexpressing two lipid regulatory proteins--Brummer lipase (Bmm) and lipid storage droplet-2 (Lsd-2)--we found different phenotypes and responses under fed and starved conditions. Comparing with the control larva, we observed more lipid droplet accumulation by approximately twofold in oenocytes of fat-body-Bmm-overexpressing (FB-Bmm-overexpressing) mutant under fed condition, and less lipid by approximately fourfold in oenocytes of fat-body-Lsd-2-overexpressing (FB-Lsd-2-overexpressing) mutant under starved condition. Moreover, together with reduced size of lipid droplets, the lipid content in the fat body of FB-Bmm-overexpressing mutant decreases much faster than that of the control and FB-Lsd-2-overexpressing mutant during starvation. From long-term starvation assay, we found FB-Bmm-overexpressing mutant has a shorter lifespan, which can be attributed to faster consumption of lipid in its fat body. Our results demonstrate in vivo observations of direct influences of Bmm and Lsd-2 on lipid homeostasis in Drosophila larvae.

Kambara, O, Takahashi K, Hayashi M, Kuo J-L.  2012.  Assessment of density functional theory to calculate the phase transition pressure of ice at 0K. Physical Chemistry Chemical Physics. 14:11484-11490.
Kar, S, Ho YK.  2012.  Borromean windows for H+ 2 with screened Coulomb potentials. PHYSICAL REVIEW A . 86(014502)2012_13.pdf
Tsai, C-C, Hung H-H, Liu C-P, Chen Y-T, Pan C-Y.  2012.  Changes in plasma membrane surface potentials of PC12 cells as measured by Kelvin probe force microscopy. PLoS ONE. 7(4):e33849.view
Kar, S, Ho YK.  2012.  Dispersion coefficients for Li+–H and Li+–He systems with coulomb and screened coulomb potentials. International Journal of Quantum Chemistry. 112:2706–2709., Number 15: Wiley Online Library Abstract2012_4.pdf

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Jiang, Z, Kar S, Ho YK.  2012.  Doubly excited non-autoionizing 1, 3Pe and 1, 3Do states of two-electron highly stripped atoms. Physica Scripta. 85:065304., Number 6: IOP Publishing Abstract2012_5.pdf

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Pandey, MK, Ho YK.  2012.  Effect of static electric field on cross sections in antiproton impact ionization of atomic helium. Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms. : Elsevier Abstract2012_6.pdf

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Das, D, Raha D, Chen WC, Chen KH, Wu CT, Chen LC.  2012.  Effect of substrate bias on the promotion of nanocrystalline silicon growth from He-diluted SiH4plasma at low temperature. J. Mater. Res.. 27:1303.
Chou, CT, Tang WL, Lin CH, Liu CH, Chen LC, Chen KH.  2012.  Effect of substrate temperature on orientation of subphthalocyanine molecule in organic photovoltaic cells. Thin Solid Films. 520:2289-2292.
Han, HC, Tseng CA, Du CY, A.Ganguly, Chong CW, Wang SB, Lin CF, Chang SH, Su CC, Lee JH, Chen KH, Chen LC.  2012.  Enhancing efficiency with fluorinated interlayer in small molecule organic solar cell. J. Mater. Chem.. 22:22899.
Chuang, HC, Chang CR, Chen C-C, Chang MS.  2012.  An external cavity diode laser using a volume holographic grating. Optics and Laser Technology. 44(7):2182-2185.