Verification of the existence of quadruplex structure in native human telomeres and determination of the major structure of d(T(2)AG(3))(4) (H24) in K(+) solution are the major questions regarding the structure of human telomeres. We have synthesized a fluorescent probe of 3,6-bis(1-methyl-4-vinylpyridinium)carbazole diiodide (BMVC) that has a very high binding affinity for G-quadruplex H24. BMVC stabilizes quadruplex structures and acts as a sensitive probe to the local environment. Although the circular dichroism patterns of H24 are different in Na(+) and K(+) solutions, similar binding behaviors of BMVC to H24 in these solutions led us to suggest that the major G-quadruplex structure of H24 in K(+) solution is very likely similar to that in Na(+) solution. Of particular interest is the fluorescent band detected at -575 nm in quadruplex H24 and at -545 nm in duplex DNA. In addition, the intensity of BMVC fluorescence increases by two orders of magnitudes upon interaction with either duplex or G-quadruplex DNA. BMVC has a greater binding preference for G-quadruplex H24 than for duplex DNA. Analyzing the BMVC fluorescence at the ends of metaphase chromosomes and other regions of chromosomes allowed us to verify the presence of G-quadruplex structure in human telomeres for the first time. Using fluorescence lifetime imaging microscopy, the longer decay time of BMVC in G-quadruplex H24 than in duplex DNA allowed us to map the G-quadruplex structure in human metaphase chromosomes.

Evanescent-wave cavity ring-down spectroscopy is applied to investigate the adsorption behavior of rhodamine B at three different interfaces. The adsorption equilibrium constant (Kads) and adsorption free energy of rhodamine B at the silica/methanol interface are determined to be (1.5 ± 0.2) × 104 M-1 and -23.8 ± 0.4 kJ/mol by use of a Langmuir isotherm model. A Langmuir-based kinetic model is also developed to determine the corresponding adsorption and desorption rate constants of (1.02 ± 0.03) × 102 M-1 s-1 and (7.1 ± 0.2) × 10-3 s-1, from which Kads is obtained to be (1.45 ± 0.09) × 104 M-1, in agreement with the value determined under equilibrium conditions. Similarly, when rhodamine B is at the chlorotrimethylsilane-immobilized silica/methanol interface, the adsorption and desorption rate constants are determined to be (1.7 ± 0.2) × 102 M-1 s-1 and (5.0 ± 1.0) × 10-3 s-1· The subsequent Kads is (3.6 ± 0.4) × 104 M-1, which is larger than that at the silica/methanol interface. The former adsorption is dominated by hydrophobic interaction, while the latter is subject to electrostatic attraction. When rhodamine B is at the silica/water interface, there exist three chemical forms, including zwitterion (R+B -), cation (RBH+), and lactone (RBL). A combination of double-layer and Langmuir competitive models is used to fit the adsorption isotherm as a function of solution pH, yielding Kads of (2.5 ± 0.2) × 104 M-1 and (1.1 ± 0.2) × 105 M-1 for R+B- and RBH +, respectively. RBL is considered to have the same Kads value as R+B-. © 2010 American Chemical Society.

The orientation dependence for the Br atom formation in the reaction of the oriented OH radicals with HBr molecules at 0.26 eV collision energy has been observed for the first time using the hexapole electric field, and we found that the reaction cross-section for O-end attack is more favorable than that for H-end attack by a factor of 3.4 ± 2.3. © the Owner Societies.

In one-photon dissociation of gaseous acetyl chloride at 248 nm, time-resolved Fourier-transform infrared emission spectroscopy is used to detect the fragments of HCl, CO, and CH2 in the presence of Ar or O 2. The high-resolution spectra of HCl and CO are analyzed to yield the corresponding internal energy deposition of 8.9 ± 1.1 and 6.2 ± 0.9 kcal/mol. The presence of the CH2 fragment is verified by detecting the CO2 product resulting from the reaction of CH 2 and the added O2. The probability of the HCl formation via a hot Cl reaction with the precursor is examined to be negligible by performing two experiments, the CH3COCl pressure dependence and the measurement of Br2 with Cl reaction. The HCl elimination channel under the Ar addition is verified to be slowed by 2 orders of magnitude, as compared to the Cl elimination channel. The observed fragments are proposed to dissociate on the hot ground electronic state via collision-induced internal conversion. A two-body dissociation channel is favored leading to HCl and CH2CO, followed by secondary dissociation. © 2010 American Chemical Society.

Kinetics of photoinduced electron transfer (ET) from oxazine 1 dye to TiO2 nanoparticles (NPs) surface is studied at a single molecule level by using confocal fluorescence microscopy. Upon irradiation with a pulsed laser at 630 nm, the fluorescence lifetimes sampled among 100 different dye molecules are determined to yield an average lifetime of 2.9 ± 0.3 ns, which is close to the value of 3.0 ± 0.6 ns measured on the bare coverslip. The lifetime proximity suggests that most interfacial electron transfer (IFET) processes for the current system are inefficient, probably caused by physisorption between dye and the TiO2 film. However, there might exist some molecules which are quenched before fluorescing and fail to be detected. With the aid of autocorrelation analysis under a three-level energy system, the IFET kinetics of single dye molecules in the conduction band of TiO2 NPs is evaluated to be (1.0 ± 0.1)×104 s-1 averaged over 100 single molecules and the back ET rate constant is 4.7 ± 0.9 s-1. When a thicker TiO2 film is substituted, the resultant kinetic data do not make a significant difference. The trend of IFET efficacy agrees with the method of fluorescence lifetime measurements. The obtained forward ET rate constants are about ten times smaller than the photovoltage response measured in an assembled dye-sensitized solar cell. The discrepancy is discussed. The inhomogeneous and fluctuation characters for the IFET process are attributed to microenvironment variation for each single molecule. The obtained ET rates are much slower than the fluorescence relaxation. Such a small ET quantum yield is yet feasibly detectable at a single molecule level. © 2010 American Chemical Society.