Publications

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2013
Chen, S-Y, Lu Y-Y, Shih F-Y, Ho P-H, Chen Y-F, Chen C-W, Chen Y-T, Wang W-H.  2013.  Biologically Inspired Graphene-Chlorophyll Phototransistors with High Gain. Carbon. 63:23-29.view
Li, B-R, Chen C-W, Yang W-L, Lin T-Y, Pan C-Y, Chen Y-T.  2013.  Biomolecular recognition with a sensitivity-enhanced nanowire transistor biosensor. Biosensors and Bioelectronics. 45:252–259.view
CC, K, WC H, CW K, ZF W, CC C, CC C, CL W, TC C, J S, LJ H.  2013.  Chemical principles for the design of a novel fluorescent probe with high cancer-targeting selectivity and sensitivity.. Integrative biology : quantitative biosciences from nano to macro. 5(10):1217-28. AbstractWebsite

Understanding of principles governing selective and sensitive cancer targeting is critical for development of chemicals for cancer diagnostics and treatment. We determined the underlying mechanisms of how a novel fluorescent small organic molecule, 3,6-bis(1-methyl-4-vinylpyridinium)carbazole diiodide (BMVC), selectively labels cancer cells but not normal cells. We show that BMVC is retained in the lysosomes of normal cells. In cancer cells, BMVC escapes lysosomal retention and localizes to the mitochondria or to the nucleus, where DNA-binding dramatically increases BMVC fluorescence intensity, allowing it to light up only cancer cells. Structure-function analyses of BMVC derivatives show that hydrogen-bonding capacity is a key determinant of lysosomal retention in normal cells, whereas lipophilicity directs these derivatives to the mitochondria or the nucleus in cancer cells. In addition, drug-resistant cancer cells preferentially retain BMVC in their lysosomes compared to drug-sensitive cancer cells, and BMVC can be released from drug-resistant lysosomes using lysosomotropic agents. Our results further our understanding of how properties of cellular organelles differ between normal and cancer cells, which can be exploited for diagnostic and/or therapeutic use. We also provide physiochemical design principles for selective targeting of small molecules to different organelles. Moreover, our results suggest that agents which can increase lysosomal membrane permeability may re-sensitize drug-resistant cancer cells to chemotherapeutic agents.

Liao, C-D, Lu Y-Y, Tamalampudi SR, Cheng H-C, Chen Y-T.  2013.  Chemical-vapor-deposition synthesis and raman spectroscopic characterization of large-area graphene sheets. Journal of Physical Chemistry, A. 117:9454-9461.view
Jana, D, Sun CL, Chen LC, Chen KH.  2013.  Effect of chemical doping of boron and nitrogen on the electronic, optical, and electrochemical properties of carbon nanotubes. Progress in Materials Science. 58:565–635.
Lee, Y-R, Su Y-H, Chou L-W, Lee J-R, Lin J-C, and J.-K.Wang.  2013.  Exploring Azobenzenethiol Adsorption on the Ag/Ge(111) Surface with Surface Raman Spectroscopy. J. Phys. Chem. C.. Vol. 117:21823-21831.jpcc_vol_117_21823-218312013.pdf
Hsu, HC, Shown I, Wei HY, Chang YC, Du HY, Lin YG, Wang CH, Chen LC, Lin YC, Chen KH.  2013.  Graphene Oxide based Photocatalyst for CO2 to Methanol Conversion. Nanoscale. 5:262-268.
Hwang, J-S, Liu T-Y, Chattopadhyay S, Hsu G-M, Basilio AM, Chen H-W, Hsu Y-K, Tu W-H, Lin Y-G, Chen K-H, Li C-C, Wang S-B, Chen H-Y, Chen L-C.  2013.  Growth of β-Ga2O3 and GaN nanowires on GaN for photoelectrochemical hydrogen generation. Nanotechnology. 24:055401.
Han, HC, Chong CW, Wang SB, Heh D, Tseng CA, Huang YF, Chattopadhyay S, Chen KH, Lin CF, Lee JH, Chen LC.  2013.  High K nanophase zinc oxide on biomimetic silicon nanotip array as super-capacitors. Nano Letters. 13:1422-1428.
Hwang, JS, Lin YH, Hwang JY, Chang R, Chattopadhyay S, Chen CJ, Chen P, Chiang HP, Tsai TR, Chen LC, Chen KH.  2013.  Imaging layer number and stacking order through formulating Raman fingerprints obtained from hexagonal single crystals of few layer graphene. Nanotechnology. 24:015702.
Lin, T-Y, Li B-R, Tsai S-T, Chen C-W, Chen C-H, Chen Y-T, Pan C-Y.  2013.  Improved silicon nanowire field-effect transistors for fast protein-protein interaction screening. Lab on a Chip. 13:676–684.view
Chu, C-J, Yeh C-S, Liao C-K, Tsai L-C, Huang C-M, Lin H-Y, Shyue J-J, Chen Y-T, Chen C-D.  2013.  Improving Nanowire Sensing Capability by Electrical Field Alignment of Surface Probing Molecules. Nano Letters. 13:2564–2569.view
TY, T, ZF W, CH C, TC C.  2013.  In-cell optical imaging of exogenous G-quadruplex DNA by fluorogenic ligands.. Nucleic acids research. AbstractWebsite

Guanine-rich oligonucleotides (GROs) are promising therapeutic candidate for cancer treatment and other biomedical application. We have introduced a G-quadruplex (G4) ligand, 3,6-bis(1-methyl-4-vinylpyridinium) carbazole diiodide, to monitor the cellular uptake of naked GROs and map their intracellular localizations in living cells by using confocal microscopy. The GROs that form parallel G4 structures, such as PU22, T40214 and AS1411, are detected mainly in the lysosome of CL1-0 lung cancer cells after incubation for 2 h. On the contrary, the GROs that form non-parallel G4 structures, such as human telomeres (HT23) and thrombin binding aptamer (TBA), are rarely detected in the lysosome, but found mainly in the mitochondria. Moreover, the fluorescence resonant energy transfer studies of fluorophore-labeled GROs show that the parallel G4 structures can be retained in CL1-0 cells, whereas the non-parallel G4 structures are likely distorted in CL1-0 cells after cellular uptake. Of interest is that the distorted G4 structure of HT23 from the non-parallel G4 structure can reform to a probable parallel G4 structure induced by a G4 ligand in CL1-0 living cells. These findings are valuable to the design and rationale behind the possible targeted drug delivery to specific cellular organelles using GROs.

Chou, JP, Hsing CR, Chen JC, Lee JY, Wei CM.  2013.  New structural model for Na6Si3 surface magic cluster on the Si(111)-7x7 surface. Surface Science. 616:137-142.
Chang, TN, Fang TK, Ho YK.  2013.  One- and two-photon ionization of hydrogen atom embedded in Debye plasmas, Physics of Plasmas. Physics of Plasmas. 20:092110.2013_10.pdf
Chou, YS, Chang CC, Chang TC, Yang TL, Young TH, Lou PJ.  2013.  Photo-Induced Antitumor Effect of 3,6-Bis(1-methyl-4-vinylpyridinium) Carbazole Diiodide. Biomed Research International. AbstractWebsite

We have applied a fluorescent molecule 3,6-bis(1-methyl-4-vinylpyridinium) carbazole diiodide (BMVC) for tumor targeting and treatment. In this study, we investigated the photo-induced antitumor effect of BMVC. In vitro cell line studies showed that BMVC significantly killed TC-1 tumor cells at light dose greater than 40 J/cm(2). The fluorescence of BMVC in the tumor peaked at 3 hours and then gradually decreased to reach the control level a. er 24 hours. In vivo tumor treatment studies showed BMVC plus light irradiation (iPDT) significantly inhibited the tumor growth. At day 24 a. er tumor implantation, tumor volume was measured to be 225 +/- 79 mm(3), 2542 +/- 181 mm(3), 1533 +/- 766 mm(3), and 1317 +/- 108 mm(3) in the iPDT, control, light-only, and BMVC-only groups, respectively. Immunohistochemistry studies showed the microvascular density was significantly lower in the iPDT group. Taken together, our results demonstrated that BMVC may be a potent tumor-specific photosensitizer (PS) for PDT.

Hsueh, C-H, Tsai Y-C, Wu K-S, Chang M-S, Wu WC.  2013.  Pseudospin orders in the supersolid phases in binary Rydberg-dressed Bose-Einstein condensates. Physical Review A . 88:043646.
Liao, GB, Chen YQ, Bareil PB, Sheng Y, Chiou A, Chang MS.  2013.  Radiation Pressure on a Biconcave Human Red Blood Cell and the Resulting Deformation in a Pair of Parallel Optical Traps. Journal of Biophotonics. 7(10):782-787.
Wong, CY, Chen SK, Lo* AY, Tseng CM, Lin CY, Liu* SB.  2013.  Roles of Organic Acids during Electrooxidation Reaction over Pt-Supported Carbon Electrodes in Direct Methanol Fuel Cells. International Journal of Hydrogen Energy.
Tsai, RF, Du KJ, Cheng TY, Ho GH, Wu PH, Liu SB, Tsai* TC.  2013.  Solid State Synthesis of Mesoporous MFI Zeolite from Self Bonded Pellet of Silica. Catalysis Today. 204:30-37.
Tseng, T-Y, Chien C-H, Chu J-F, Huang W-C, Lin M-Y, Chang C-C, Chang T-C.  2013.  A specific fluorescent probe for visualizing G-quadruplex DNA by fluorescence lifetime imaging microscopy. J Biomed Opt.. 18(10):101309. AbstractWebsite

ABSTRACT. The importance of guanine-quadruplex (G4) is not only in protecting the ends of chromosomes for human telomeres but also in regulating gene expression for several gene promoters. However, the existence of G4 structures in living cells is still in debate. A fluorescent probe, 3,6-bis(1-methyl-2-vinylpyridinium) carbazole diiodide (o-BMVC), for differentiating G4 structures from duplexes is characterized. o-BMVC has a large contrast in fluorescence decay time, binding affinity, and fluorescent intensity between G4 structures and duplexes, which makes it a good candidate for probing G4 DNA structures. The fluorescence decay time of o-BMVC upon interaction with G4 structures of telomeric G-rich sequences is ∼2.8  ns and that of interaction with the duplex structure of a calf thymus is ∼1.2  ns. By analyzing its fluorescence decay time and histogram, we were able to detect one G4 out of 1000 duplexes in vitro. Furthermore, by using fluorescence lifetime imaging microscopy, we demonstrated an innovative methodology for visualizing the localization of G4 structures as well as mapping the localization of different G4 structures in living cells.

Cai, Y, Chuu CP, Wei CM, Chou MY.  2013.  Stability and Electronic Properties of Two-Dimensional Silicene and Germanene on Graphene . Physical Review B . 88:245408.
Wong, D-P, Tseng H-P, Chen Y-T, Hwang B-J, Chen L-C, Chen K-H.  2013.  A stable silicon/graphene composite using solvent exchange method as anode material for lithium ion batteries. Carbon. 63:397-403.view
Wang, SB, Huang YF, Chattopadhyay S, Chang SJ, Chen RS, Chong CW, Hu MS, Chen LC, Chen KH.  2013.  Surface plasmon-enhanced gas sensing in single gold peapodded-silica nanowire. Asia Materials.
Li, B-R, Hsieh Y-J, Chen Y-X, Chung Y-T, Pan C-Y, Chen Y-T.  2013.  An Ultra-Sensitive Nanowire-Transistor Biosensor for Detecting Dopamine Release from Living PC12 Cells under Hypoxic Stimulation. Journal of the American Chemical Society. 135:16034−16037.view